Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction atp-dependent dna helicase ruvb | PSDVSF_10690 | P61531 | Negative | 1104371 - 1105360 | 36559.2 |
| holliday junction atp-dependent dna helicase ruva | PSDVSF_10700 | C6C065 | Negative | 1105357 - 1105974 | 22158.9 |
| hypothetical protein | PSDVSF_10710 | Not Available | Positive | 1106095 - 1106589 | 17613.2 |
| crossover junction endodeoxyribonuclease ruvc | PSDVSF_10720 | C4XIK0 | Negative | 1106655 - 1107161 | 18000.1 |
| putative transcriptional regulatory protein | PSDVSF_10730 | C6C067 | Negative | 1107163 - 1107906 | 27130.7 |
| ribosomal rna large subunit methyltransferase e | PSDVSF_10740 | C6C068 | Negative | 1107960 - 1108559 | 22405.9 |
| hypothetical protein | PSDVSF_10750 | Not Available | Positive | 1108625 - 1110148 | 57480.4 |
| Trna-ala | Not Available | Not Available | Positive | 1110194 - 1110269 | Not Available |
| hypothetical protein | PSDVSF_10760 | Not Available | Negative | 1110366 - 1110539 | 6785.9 |
| putative manganese efflux pump mntp | PSDVSF_10770 | Q727E5 | Positive | 1110762 - 1111331 | 20388.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
