Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_09720 | Q9HY42 | Negative | 988688 - 989470 | 29210.7 |
| penicillin-binding protein | PSDVSF_09730 | Q07806 | Negative | 989485 - 991827 | 86977.3 |
| hypothetical protein | PSDVSF_09740 | Not Available | Negative | 991838 - 992404 | 21274.9 |
| carbohydrate isomerase kpsf/gutq family protein | PSDVSF_09750 | Q8Z3G6 | Negative | 992419 - 993432 | 35105.2 |
| amidophosphoribosyltransferase | PSDVSF_09760 | P00497 | Negative | 993448 - 994863 | 52733.9 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) | PSDVSF_09770 | O28994 | Negative | 994884 - 998120 | 119258.0 |
| hypothetical protein | PSDVSF_09780 | P24252 | Positive | 998895 - 999845 | 36191.3 |
| hypothetical protein | PSDVSF_09790 | Not Available | Negative | 999842 - 1000621 | 28789.8 |
| methionine--trna ligase | PSDVSF_09800 | P23395 | Negative | 1000747 - 1002687 | 73972.5 |
| hypothetical protein | PSDVSF_09810 | P37541 | Negative | 1002736 - 1003971 | 47127.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
