Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_09630 | Not Available | Positive | 977660 - 978118 | 16205.1 |
| atp-dependent dna ligase | PSDVSF_09640 | Not Available | Negative | 978121 - 978861 | 27782.6 |
| radical sam/cys-rich domain protein | PSDVSF_09650 | O57854 | Negative | 979035 - 979979 | 34606.7 |
| hypothetical protein | PSDVSF_09660 | Q54YZ9 | Negative | 980305 - 983523 | 119448.0 |
| hypothetical protein | PSDVSF_09670 | Not Available | Positive | 983594 - 983803 | 8290.08 |
| Trna-ser | Not Available | Not Available | Positive | 984415 - 984506 | Not Available |
| dihydroorotate dehydrogenase | PSDVSF_09680 | C6BW12 | Negative | 984571 - 985488 | 31637.5 |
| dihydroorotate dehydrogenase | PSDVSF_09690 | P58885 | Negative | 985501 - 986286 | 28638.6 |
| peptidase u32 | PSDVSF_09700 | P59916 | Positive | 986298 - 988283 | 74601.6 |
| hypothetical protein | PSDVSF_09710 | P80928 | Negative | 988341 - 988679 | 12289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
