Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_09340 | Q52880 | Positive | 951659 - 952057 | 15000.0 |
| hypothetical protein | PSDVSF_09350 | Not Available | Negative | 952128 - 952637 | 19450.6 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | PSDVSF_09360 | Q9PKV2 | Negative | 952652 - 954490 | 67593.7 |
| hypothetical protein | PSDVSF_09370 | Not Available | Negative | 954866 - 955030 | 6090.39 |
| hemerythrin | PSDVSF_09380 | Q58157 | Positive | 955102 - 955506 | 16249.3 |
| Trna-arg | Not Available | Not Available | Positive | 955565 - 955641 | Not Available |
| flavin prenyltransferase ubix | PSDVSF_09390 | Q9HX08 | Positive | 955807 - 956373 | 20211.2 |
| upf0173 metal-dependent hydrolase | PSDVSF_09400 | Q317E4 | Positive | 956383 - 957060 | 24525.6 |
| hypothetical protein | PSDVSF_09410 | Q72DX8 | Negative | 957057 - 958871 | 67810.9 |
| hypothetical protein | PSDVSF_09420 | Not Available | Positive | 959152 - 960459 | 47088.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
