Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycine dehydrogenase (decarboxylating) subunit 1 | PSDVSF_00270 | C6C0V0 | Negative | 26541 - 27875 | 48582.8 |
| glycine cleavage system h protein | PSDVSF_00280 | Q311A6 | Negative | 27948 - 28328 | 13769.0 |
| hypothetical protein | PSDVSF_00290 | Q9CQL0 | Positive | 28668 - 29336 | 25043.1 |
| putative nickel-responsive regulator | PSDVSF_00300 | C6C0U7 | Positive | 29349 - 29768 | 15669.8 |
| gtp cyclohydrolase | PSDVSF_00310 | C6C0U6 | Positive | 29769 - 30542 | 28723.1 |
| hypothetical protein | PSDVSF_00320 | Not Available | Positive | 30571 - 30942 | 13323.2 |
| flagellar basal body rod protein flgg | PSDVSF_00330 | Q57466 | Positive | 31023 - 31349 | 11435.4 |
| hypothetical protein | PSDVSF_00340 | Not Available | Positive | 31472 - 32869 | 50932.3 |
| sigma-54-dependent fis family transcriptional regulator | PSDVSF_00350 | G3XCV0 | Positive | 33092 - 34108 | 38147.7 |
| hypothetical protein | PSDVSF_00360 | Not Available | Positive | 34232 - 37534 | 121091.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
