Caldicellulosiruptor diazotrophicus YA01

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Order

Caldicellulosiruptorales

Family

Caldicellulosiruptoraceae

Genus

Caldicellulosiruptor

Description

Caldicellulosiruptor diazotrophicus YA01 is a Gram-positive bacterium notable for its distinctive characteristics and ecological relevance. This organism possesses flagella, which may contribute to its motility and ability to thrive in various environments. C. diazotrophicus YA01 has a unique genomic structure, with three replicons identified, indicating a complex genetic organization that could play a role in its adaptability and metabolic capabilities. The presence of flagella suggests that C. diazotrophicus YA01 may be able to move towards favorable conditions, potentially enhancing its survival in diverse habitats. The ability to perform nitrogen fixation is an important ecological trait, as it allows the bacterium to convert atmospheric nitrogen into a form that can be utilized by plants and other organisms, thereby contributing to nutrient cycling in ecosystems. Caldicellulosiruptor diazotrophicus YA01 is referenced in three sequence accessions: AP024480.1, AP024481.1, and AP024482.1, which provide additional genetic information that can aid in understanding its physiology and ecological role. The combination of its Gram-positive nature, flagellar presence, and multiple replicons highlights the potential versatility of this bacterium in various environments, particularly in relation to its contributions to nitrogen fixation and cellulose degradation. Overall, C. diazotrophicus YA01 exemplifies the complex interactions that microbes have with their environment and their importance in ecological processes.

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathot spring; Nakabusa Hot Spring
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldicellulosiruptor diazotrophicus YA01, Complete Genome

Gene Summary

Adenine Count

836557 bp

Thymine Count

853491 bp

Guanine Count

440563 bp

Cytosine Count

462153 bp

Genome Length

2592764 bp

Protein-coding Genes

2436 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCaldiYA01_15500Q05587Negative1589262 - 159013733933.3
hypothetical proteinCaldiYA01_15510Q45584Negative1590161 - 159057715422.7
putative gtp-binding protein engbCaldiYA01_15520C0MEW6Negative1590574 - 159118823451.9
lon proteaseCaldiYA01_15530A4XJL4Negative1591206 - 159353388316.7
glycerol uptake operon antiterminator regulatory proteinCaldiYA01_15540Q46906Positive1593614 - 159418020593.7
hypothetical proteinCaldiYA01_15550Not AvailableNegative1594169 - 159454613862.1
pyridine nucleotide-disulfide oxidoreductaseCaldiYA01_15560P72300Negative1594574 - 159583646472.9
fad/nad(p)-binding oxidoreductaseCaldiYA01_15570A0A0R3K2G2Negative1595838 - 159731955594.0
hypothetical proteinCaldiYA01_15580Not AvailableNegative1597436 - 15976066341.39
alcohol dehydrogenaseCaldiYA01_15590P13604Positive1597761 - 159885540722.2

Displaying genes 1591 – 1600 of 2500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.