Rhodoferax lithotrophicus MIZ03

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax lithotrophicus MIZ03 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The complete genome sequence of R. lithotrophicus MIZ03 is accessible under the accession number AP024238.1, providing a resource for further genomic studies and analyses. As a member of the genus Rhodoferax, this bacterium is likely involved in various ecological processes, including biogeochemical cycling and potential bioremediation applications. Its lithotrophic capabilities suggest that it may utilize inorganic compounds as electron donors, which can play a significant role in sustaining microbial communities in specific environments. The ability to metabolize inorganic substrates could contribute to nutrient cycling, especially in habitats where organic matter is limited. In summary, Rhodoferax lithotrophicus MIZ03, with its distinguishing Gram-negative properties, rod shape, and motility via flagella, presents unique biological characteristics that may facilitate its ecological roles. Understanding this organism's metabolic pathways and interactions within its environment can provide insights into its function in microbial ecosystems and its potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax lithotrophicus
StrainMIZ03

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax lithotrophicus MIZ03
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax lithotrophicus MIZ03, Complete Genome

Gene Summary

Adenine Count

1079385 bp

Thymine Count

1073030 bp

Guanine Count

1386805 bp

Cytosine Count

1397461 bp

Genome Length

4936681 bp

Protein-coding Genes

4757 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMIZ03_2791Q795R8Negative2847895 - 284917545280.8
thioredoxin 1MIZ03_2792Q9X2T1Positive2849356 - 284968812028.7
transcription termination factor rhoMIZ03_2793Q7NXP1Positive2849895 - 285115747556.7
spermidine/putrescine import atp-binding protein potaMIZ03_2794Q6F0V4Negative2851211 - 285185523644.7
hypothetical proteinMIZ03_2795P31549Negative2851848 - 285350660108.0
thiamine-binding periplasmic proteinMIZ03_2796Q7CR85Negative2853556 - 285456936362.0
hypothetical proteinMIZ03_2797Not AvailableNegative2854783 - 285531919655.7
serine--trna ligaseMIZ03_2798Q21TF1Negative2855345 - 285666748362.9
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseMIZ03_2799Q12EY5Negative2856742 - 285771934765.9
fkbp-type 16 kda peptidyl-prolyl cis-trans isomeraseMIZ03_2800P0AEM2Negative2857716 - 285817415883.7

Displaying genes 2791 – 2800 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.