Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylputrescine oxidoreductase | MIZ03_2681 | P37906 | Negative | 2733879 - 2735180 | 47019.8 |
| guanidinobutyrase | MIZ03_2682 | Q7P0S6 | Negative | 2735203 - 2736120 | 32772.2 |
| hypothetical protein | MIZ03_2683 | O31540 | Positive | 2736152 - 2737213 | 38049.7 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | MIZ03_2684 | Q21X23 | Negative | 2737223 - 2737744 | 18395.3 |
| hypothetical protein | MIZ03_2685 | Q05024 | Positive | 2737937 - 2738401 | 15589.5 |
| dipeptide transport system permease protein dppb | MIZ03_2686 | A0A0H2ZGW7 | Positive | 2738493 - 2739497 | 36569.2 |
| dipeptide transport system permease protein dppc | MIZ03_2687 | A0A0H2ZFV0 | Positive | 2739503 - 2740399 | 31876.6 |
| dipeptide transport atp-binding protein dppd | MIZ03_2688 | A0A0H2ZGN6 | Positive | 2740412 - 2741383 | 35081.9 |
| d,d-dipeptide transport atp-binding protein ddpf | MIZ03_2689 | A0A0H2ZH52 | Positive | 2741380 - 2742384 | 36413.4 |
| periplasmic dipeptide transport protein | MIZ03_2690 | P23847 | Positive | 2742448 - 2744073 | 60465.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
