Rhodoferax lithotrophicus MIZ03

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax lithotrophicus MIZ03 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The complete genome sequence of R. lithotrophicus MIZ03 is accessible under the accession number AP024238.1, providing a resource for further genomic studies and analyses. As a member of the genus Rhodoferax, this bacterium is likely involved in various ecological processes, including biogeochemical cycling and potential bioremediation applications. Its lithotrophic capabilities suggest that it may utilize inorganic compounds as electron donors, which can play a significant role in sustaining microbial communities in specific environments. The ability to metabolize inorganic substrates could contribute to nutrient cycling, especially in habitats where organic matter is limited. In summary, Rhodoferax lithotrophicus MIZ03, with its distinguishing Gram-negative properties, rod shape, and motility via flagella, presents unique biological characteristics that may facilitate its ecological roles. Understanding this organism's metabolic pathways and interactions within its environment can provide insights into its function in microbial ecosystems and its potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax lithotrophicus
StrainMIZ03

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax lithotrophicus MIZ03
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax lithotrophicus MIZ03, Complete Genome

Gene Summary

Adenine Count

1079385 bp

Thymine Count

1073030 bp

Guanine Count

1386805 bp

Cytosine Count

1397461 bp

Genome Length

4936681 bp

Protein-coding Genes

4757 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxyethylthiazole kinaseMIZ03_1891Q21VL4Positive1930349 - 193122430595.8
thiamine-phosphate synthaseMIZ03_1892Q21VL5Positive1931221 - 193186522373.3
hydroxymethylpyrimidine/phosphomethylpyrimidine kinaseMIZ03_1893P56904Positive1931918 - 193275729201.6
hypothetical proteinMIZ03_1894Not AvailableNegative1932842 - 193399341722.4
hypothetical proteinMIZ03_1895P77473Negative1934001 - 193585168261.7
udp-2,3-diacylglucosamine hydrolaseMIZ03_1896Q9K0P2Negative1935906 - 193668830098.0
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthaseMIZ03_1897Q7NPW5Negative1936781 - 193752427337.3
hypothetical proteinMIZ03_1898Q90240Negative1937530 - 193856739227.4
hypothetical proteinMIZ03_1899Not AvailablePositive1938620 - 19387394657.98
hypothetical proteinMIZ03_1900Not AvailableNegative1938791 - 193982237761.8

Displaying genes 1891 – 1900 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.