Rhodoferax lithotrophicus MIZ03

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax lithotrophicus MIZ03 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This organism possesses a single replicon, indicating a streamlined genomic architecture. The complete genome sequence of R. lithotrophicus MIZ03 is accessible under the accession number AP024238.1, providing a resource for further genomic studies and analyses. As a member of the genus Rhodoferax, this bacterium is likely involved in various ecological processes, including biogeochemical cycling and potential bioremediation applications. Its lithotrophic capabilities suggest that it may utilize inorganic compounds as electron donors, which can play a significant role in sustaining microbial communities in specific environments. The ability to metabolize inorganic substrates could contribute to nutrient cycling, especially in habitats where organic matter is limited. In summary, Rhodoferax lithotrophicus MIZ03, with its distinguishing Gram-negative properties, rod shape, and motility via flagella, presents unique biological characteristics that may facilitate its ecological roles. Understanding this organism's metabolic pathways and interactions within its environment can provide insights into its function in microbial ecosystems and its potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax lithotrophicus
StrainMIZ03

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax lithotrophicus MIZ03
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax lithotrophicus MIZ03, Complete Genome

Gene Summary

Adenine Count

1079385 bp

Thymine Count

1073030 bp

Guanine Count

1386805 bp

Cytosine Count

1397461 bp

Genome Length

4936681 bp

Protein-coding Genes

4757 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMIZ03_1041Not AvailablePositive1044233 - 104463114681.9
nadh oxidaseMIZ03_1042A0A482NAR8Positive1044639 - 104588345364.6
hypothetical proteinMIZ03_1043O31444Positive1045950 - 104716142349.0
response regulator protein tmotMIZ03_1044Q8KR08Negative1047442 - 104810724303.8
sensor histidine kinase tmosMIZ03_1045Q8KIY1Negative1048104 - 1050995106255.0
47 kda outer membrane proteinMIZ03_1046Q8CVU7Negative1051051 - 105242748291.7
ferredoxin--nad(p)(+) reductase caradMIZ03_1047Q8GI14Negative1052505 - 105354238165.5
toluene-4-monooxygenase system, hydroxylase component subunit betaMIZ03_1048Q00460Negative1053603 - 105458937565.3
toluene-4-monooxygenase system, effector componentMIZ03_1049Q00459Negative1054599 - 105491311780.0
toluene-4-monooxygenase system, ferredoxin componentMIZ03_1050Q00458Negative1054951 - 105528612073.4

Displaying genes 1041 – 1050 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.