Lysobacter ciconiae H21R20

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Novilysobacter

Description

Lysobacter ciconiae H21R20 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism has been cataloged under the accession number CP063656.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Lysobacter ciconiae possesses a thinner peptidoglycan layer compared to Gram-positive bacteria, along with an outer membrane that can affect its interactions with the environment and influence its pathogenicity or ecological role. The rod shape is typical for many bacteria and can be associated with various ecological niches and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic structure, which may confer certain efficiencies in replication and gene expression. Bacteria with such genomic configurations often exhibit specialized adaptations to their environments. In terms of biological or ecological insights, Lysobacter species are known for their role in soil ecosystems, where they can contribute to the degradation of organic matter. Given the traits of Lysobacter ciconiae, it may play a role in nutrient cycling and maintaining soil health. Understanding its characteristics could provide further insights into its ecological function and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusNovilysobacter
SpeciesNovilysobacter ciconiae
StrainH21R20

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter ciconiae H21R20, Complete Genome

Gene Summary

Adenine Count

476518 bp

Thymine Count

476660 bp

Guanine Count

981487 bp

Cytosine Count

979626 bp

Genome Length

2914291 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
upf0149 family proteinINQ41_13060P0AD05Positive2891539 - 289226427153.9
trar/dksa family transcriptional regulatorINQ41_13065P0CAU3Positive2892393 - 289277914678.9
nadp-dependent isocitrate dehydrogenaseINQ41_13070P16100Positive2892818 - 289504980931.3
class i sam-dependent methyltransferaseINQ41_13075Not AvailablePositive2895337 - 289605025530.6
pseudouridine synthaseINQ41_13080Q8PQN3Positive2896058 - 289661820595.9
hybrid sensor histidine kinase/response regulatorINQ41_13085Q03228Positive2896719 - 289783139913.8
hypothetical proteinINQ41_13090Not AvailableNegative2897886 - 289832915907.0
atp-dependent helicase hrpbINQ41_13095P37024Negative2898418 - 290092292132.2
tatd family hydrolaseINQ41_13100E1SKR8Positive2901296 - 290213530981.7
abc transporter permeaseINQ41_13105P0AFN8Negative2902145 - 290291528014.2

Displaying genes 2611 – 2620 of 2630 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.