Lysobacter ciconiae H21R20

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Novilysobacter

Description

Lysobacter ciconiae H21R20 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism has been cataloged under the accession number CP063656.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Lysobacter ciconiae possesses a thinner peptidoglycan layer compared to Gram-positive bacteria, along with an outer membrane that can affect its interactions with the environment and influence its pathogenicity or ecological role. The rod shape is typical for many bacteria and can be associated with various ecological niches and metabolic capabilities. The presence of a single replicon suggests a streamlined genomic structure, which may confer certain efficiencies in replication and gene expression. Bacteria with such genomic configurations often exhibit specialized adaptations to their environments. In terms of biological or ecological insights, Lysobacter species are known for their role in soil ecosystems, where they can contribute to the degradation of organic matter. Given the traits of Lysobacter ciconiae, it may play a role in nutrient cycling and maintaining soil health. Understanding its characteristics could provide further insights into its ecological function and potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusNovilysobacter
SpeciesNovilysobacter ciconiae
StrainH21R20

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter ciconiae H21R20, Complete Genome

Gene Summary

Adenine Count

476518 bp

Thymine Count

476660 bp

Guanine Count

981487 bp

Cytosine Count

979626 bp

Genome Length

2914291 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dksa/trar family c4-type zinc finger proteinINQ41_06010P41039Positive1313622 - 13138859290.84
hypothetical proteinINQ41_06015Not AvailablePositive1313920 - 131433915435.4
rna-binding transcriptional accessory proteinINQ41_06020P46837Negative1314359 - 131681888503.8
ferredoxin--nadp reductaseINQ41_06025Q44532Negative1316940 - 131774930507.4
universal stress proteinINQ41_06030P74897Negative1317834 - 131825614509.5
aarf/abc1/ubib kinase family proteinINQ41_06035P73627Negative1318339 - 132013264737.9
duf488 domain-containing proteinINQ41_06040Not AvailablePositive1320200 - 132075420779.8
abc transporter atp-binding proteinINQ41_06045P33116Negative1320765 - 132264870035.8
heavy-metal-associated domain-containing proteinINQ41_06050Not AvailablePositive1322964 - 13232038088.53
fumarate hydrataseINQ41_06055P40720Positive1323370 - 132489054296.5

Displaying genes 1201 – 1210 of 2630 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.