Rodentibacter haemolyticus 1625_19, 1625/19

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter haemolyticus 1625_19, also designated as 1625/19, is a rod-shaped bacterium that has been classified under the genus Rodentibacter. It is characterized by having a single replicon, which suggests a streamlined genomic organization that may be advantageous for its survival and reproduction in specific environments. The genomic information for this bacterium is available under the accession number CP063056.1, which allows for further analysis and comparison with other microbial species. As a member of the Rodentibacter genus, R. haemolyticus is likely to inhabit environments associated with rodent hosts, which could influence its ecological role and interactions within these ecosystems. The hemolytic properties suggested by its name indicate that this bacterium may possess the ability to lyse red blood cells, which could have implications for its pathogenic potential or its interactions with the host's immune system. Understanding the traits of Rodentibacter haemolyticus 1625_19 provides insight into its potential role in the microbiome of rodents and its ecological significance. Its hemolytic capability may contribute to its survival and adaptation in the competitive microbial landscapes that exist in rodent habitats. This bacterium’s traits highlight the complex relationships between microbial species and their hosts, emphasizing the importance of studying such organisms within their ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter haemolyticus
Strain1625_19, 1625/19

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter haemolyticus 1625_19, 1625/19, Complete Genome

Gene Summary

Adenine Count

739738 bp

Thymine Count

737859 bp

Guanine Count

508501 bp

Cytosine Count

510636 bp

Genome Length

2496734 bp

Protein-coding Genes

2169 genes

Non-Coding Genes

197 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (guanine(966)-n(2))-methyltransferase rsmdIHV77_04515P44869Positive938378 - 93895921799.4
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlIHV77_04520P44868Positive938968 - 93944117955.8
xylulokinaseIHV77_04525P44401Negative939587 - 94105654119.1
xylose isomeraseIHV77_04530A3N3K2Negative941112 - 94243149926.1
d-xylose abc transporter substrate-binding proteinIHV77_04535P45047Positive942678 - 94367635905.3
d-xylose abc transporter atp-binding proteinIHV77_04540P45046Positive943722 - 94523355911.4
sugar abc transporter permeaseIHV77_04545P45045Positive945237 - 94636439886.0
dna-binding transcriptional regulatorIHV77_04550P45043Positive946576 - 94773944655.3
dna-binding transcriptional repressor deorIHV77_04555P0ACK7Negative947806 - 94854327494.5
deoxyribose-phosphate aldolaseIHV77_04560Q65WA1Negative948560 - 94923423952.0

Displaying genes 991 – 1000 of 2366 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.