Xanthomonas hydrangeae GBBC 2123

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hydrangeae GBBC 2123 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notably associated with spoilage nectar, indicating its role in the degradation of organic substances in this habitat. The bacterium possesses five replicons, suggesting a complex genomic structure that may contribute to its adaptability and survival in various environments. The specific accessions associated with Xanthomonas hydrangeae GBBC 2123—LR990730.1, LR990734.1, LR990733.1, LR990732.1, and LR990731.1—provide a basis for further genetic and taxonomic studies. This genetic data could be instrumental in understanding the evolutionary relationships between Xanthomonas species and their ecological roles. From a biological and ecological perspective, Xanthomonas hydrangeae GBBC 2123's association with spoilage nectar suggests a potential role in nutrient cycling and decomposition in its habitat. By breaking down organic materials, this bacterium may contribute to the overall health of ecosystems where nectar spoilage occurs, facilitating the recycling of nutrients essential for plant growth and soil fertility. Understanding its ecological role could lead to insights into managing plant health and promoting beneficial microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hydrangeae
StrainGBBC 2123

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hydrangeae GBBC 2123
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatspoilage nectar
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hydrangeae GBBC 2123, Complete Genome

Gene Summary

Adenine Count

970976 bp

Thymine Count

971593 bp

Guanine Count

1706620 bp

Cytosine Count

1710287 bp

Genome Length

5359476 bp

Protein-coding Genes

8682 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-phosphoshikimate 1-carboxyvinyltransferaseLMG31884_27610Q3BUZ1Negative3305630 - 330694645308.9
3-phosphoshikimate 1-carboxyvinyltransferaseLMG31884_27610Q3BUZ1Negative3305630 - 330694645308.9
bifunctional chorismate mutase/prephenate dehydrataseLMG31884_27620P27603Negative3307069 - 330828043934.5
bifunctional chorismate mutase/prephenate dehydrataseLMG31884_27620P27603Negative3307069 - 330828043934.5
phosphoserine aminotransferaseLMG31884_27630Q3BUZ3Negative3308403 - 330948838729.1
phosphoserine aminotransferaseLMG31884_27630Q3BUZ3Negative3308403 - 330948838729.1
protein-methionine-sulfoxide reductase catalytic subunit msrpLMG31884_27640Q8PA98Positive3309668 - 331063636185.5
protein-methionine-sulfoxide reductase catalytic subunit msrpLMG31884_27640Q8PA98Positive3309668 - 331063636185.5
protein-methionine-sulfoxide reductase heme-binding subunit msrqLMG31884_27650Q3BUZ5Positive3310783 - 331143924825.0
protein-methionine-sulfoxide reductase heme-binding subunit msrqLMG31884_27650Q3BUZ5Positive3310783 - 331143924825.0

Displaying genes 5671 – 5680 of 9466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.