Xanthomonas hydrangeae GBBC 2123

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hydrangeae GBBC 2123 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notably associated with spoilage nectar, indicating its role in the degradation of organic substances in this habitat. The bacterium possesses five replicons, suggesting a complex genomic structure that may contribute to its adaptability and survival in various environments. The specific accessions associated with Xanthomonas hydrangeae GBBC 2123—LR990730.1, LR990734.1, LR990733.1, LR990732.1, and LR990731.1—provide a basis for further genetic and taxonomic studies. This genetic data could be instrumental in understanding the evolutionary relationships between Xanthomonas species and their ecological roles. From a biological and ecological perspective, Xanthomonas hydrangeae GBBC 2123's association with spoilage nectar suggests a potential role in nutrient cycling and decomposition in its habitat. By breaking down organic materials, this bacterium may contribute to the overall health of ecosystems where nectar spoilage occurs, facilitating the recycling of nutrients essential for plant growth and soil fertility. Understanding its ecological role could lead to insights into managing plant health and promoting beneficial microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hydrangeae
StrainGBBC 2123

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hydrangeae GBBC 2123
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatspoilage nectar
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hydrangeae GBBC 2123, Complete Genome

Gene Summary

Adenine Count

970976 bp

Thymine Count

971593 bp

Guanine Count

1706620 bp

Cytosine Count

1710287 bp

Genome Length

5359476 bp

Protein-coding Genes

8682 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome-binding factor aLMG31884_17590Q3BRP6Positive2112077 - 211246914573.1
ribosome-binding factor aLMG31884_17590Q3BRP6Positive2112077 - 211246914573.1
trna pseudouridine synthase bLMG31884_17600Q8PJ57Positive2112524 - 211347733699.8
trna pseudouridine synthase bLMG31884_17600Q8PJ57Positive2112524 - 211347733699.8
30s ribosomal protein s15LMG31884_17610Q8PJ58Positive2113634 - 211389410056.2
30s ribosomal protein s15LMG31884_17610Q8PJ58Positive2113634 - 211389410056.2
polyribonucleotide nucleotidyltransferaseLMG31884_17620B0RRB8Positive2114063 - 211617775774.3
polyribonucleotide nucleotidyltransferaseLMG31884_17620B0RRB8Positive2114063 - 211617775774.3
hypothetical proteinLMG31884_17630Not AvailableNegative2116392 - 211744437487.6
hypothetical proteinLMG31884_17630Not AvailableNegative2116392 - 211744437487.6

Displaying genes 3811 – 3820 of 9466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.