Xanthomonas hydrangeae GBBC 2123

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas hydrangeae GBBC 2123 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This species is notably associated with spoilage nectar, indicating its role in the degradation of organic substances in this habitat. The bacterium possesses five replicons, suggesting a complex genomic structure that may contribute to its adaptability and survival in various environments. The specific accessions associated with Xanthomonas hydrangeae GBBC 2123—LR990730.1, LR990734.1, LR990733.1, LR990732.1, and LR990731.1—provide a basis for further genetic and taxonomic studies. This genetic data could be instrumental in understanding the evolutionary relationships between Xanthomonas species and their ecological roles. From a biological and ecological perspective, Xanthomonas hydrangeae GBBC 2123's association with spoilage nectar suggests a potential role in nutrient cycling and decomposition in its habitat. By breaking down organic materials, this bacterium may contribute to the overall health of ecosystems where nectar spoilage occurs, facilitating the recycling of nutrients essential for plant growth and soil fertility. Understanding its ecological role could lead to insights into managing plant health and promoting beneficial microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas hydrangeae
StrainGBBC 2123

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas hydrangeae GBBC 2123
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatspoilage nectar
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas hydrangeae GBBC 2123, Complete Genome

Gene Summary

Adenine Count

970976 bp

Thymine Count

971593 bp

Guanine Count

1706620 bp

Cytosine Count

1710287 bp

Genome Length

5359476 bp

Protein-coding Genes

8682 genes

Non-Coding Genes

288 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna helicase recgLMG31884_10030Q8XD86Positive1208357 - 121050177231.1
atp-dependent dna helicase recgLMG31884_10030Q8XD86Positive1208357 - 121050177231.1
pyrimidine-specific ribonucleoside hydrolase rihaLMG31884_10040Q9P6J4Positive1210640 - 121157833657.1
pyrimidine-specific ribonucleoside hydrolase rihaLMG31884_10040Q9P6J4Positive1210640 - 121157833657.1
50s ribosomal protein l31 type bLMG31884_10050Q4UY54Positive1211615 - 121189310475.4
50s ribosomal protein l31 type bLMG31884_10050Q4UY54Positive1211615 - 121189310475.4
citrate synthaseLMG31884_10060P14165Positive1212123 - 121341247805.1
citrate synthaseLMG31884_10060P14165Positive1212123 - 121341247805.1
hypothetical proteinLMG31884_10070Not AvailableNegative1213516 - 121416624769.4
hypothetical proteinLMG31884_10070Not AvailableNegative1213516 - 121416624769.4

Displaying genes 2331 – 2340 of 9466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.