Sphingomonas aliaeris DH-S5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas aliaeris DH-S5 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This organism has a unique genomic structure, containing three replicons, indicating a complex genetic makeup that may be advantageous for adaptation and survival in various environments. The genomic data for Sphingomonas aliaeris DH-S5 can be accessed through the following GenBank accession numbers: CP061035.1, CP061036.1, and CP061037.1. The presence of flagella suggests that Sphingomonas aliaeris DH-S5 is capable of active movement, which may play a critical role in its ecological interactions, such as nutrient acquisition and colonization of specific niches. This motility could also facilitate its dispersal in various environments, potentially influencing its ecological dynamics. Given its rod shape and flagellar capability, Sphingomonas aliaeris DH-S5 may thrive in diverse habitats where motility is essential for survival. Understanding its genomic characteristics and ecological roles could provide insights into its adaptability and interactions within microbial communities. Further studies on this bacterium could elucidate its potential applications in biotechnology or environmental science, particularly in bioremediation or as a model organism for studying flagellar function and genetic diversity in bacteria.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas aliaeris
StrainDH-S5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas aliaeris DH-S5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas aliaeris DH-S5, Complete Genome

Gene Summary

Adenine Count

695033 bp

Thymine Count

700924 bp

Guanine Count

1266042 bp

Cytosine Count

1254663 bp

Genome Length

3916662 bp

Protein-coding Genes

3639 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s12 methylthiotransferase rimoH5J25_07835A5V3Z4Negative1661533 - 166282547664.0
urea carboxylase-associated family proteinH5J25_07840O31473Negative1662885 - 166353223687.1
yqci/ycgg family proteinH5J25_07845Not AvailableNegative1663529 - 166423626490.3
homogentisate 1,2-dioxygenaseH5J25_07850B0T816Negative1664294 - 166558347351.9
4-hydroxyphenylpyruvate dioxygenaseH5J25_07855Q9I576Negative1665665 - 166674439782.7
winged helix-turn-helix transcriptional regulatorH5J25_07860P62573Positive1666875 - 166732116037.4
laci family dna-binding transcriptional regulatorH5J25_07865Q98DK4Positive1667427 - 166955876041.4
bama/tama family outer membrane proteinH5J25_07870D2TN56Positive1669689 - 167179474316.6
translocation/assembly module tamb domain-containing proteinH5J25_07875Q57523Positive1671794 - 1676071148783.0
succinyl-diaminopimelate desuccinylaseH5J25_07880Q1GRJ2Negative1676081 - 167724140517.6

Displaying genes 1591 – 1600 of 4071 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.