Coprobacter secundus subsp. similis 2CBH44

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter secundus subsp. similis 2CBH44 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This subspecies is part of the genus Coprobacter, which is known to inhabit the gastrointestinal tract of various animals. The significance of Gram-negative bacteria lies in their unique cell wall structure, which consists of an outer membrane containing lipopolysaccharides, contributing to their pathogenic potential and interactions with host organisms. The bacterium has been cataloged under accession number AP023322.1, indicating its genetic sequence has been documented in a public database, which allows for further studies on its genetic characteristics and potential applications. The singular replicon suggests a streamlined genomic organization, which may influence its metabolic capabilities and ecological roles within its environment. Understanding the characteristics of Coprobacter secundus subsp. similis 2CBH44 can provide insights into its ecological interactions, particularly in the context of gut microbiota. The presence of such bacteria is essential for maintaining a balanced microbial community, which plays a crucial role in digestion and nutrient absorption in hosts. Gram-negative species like this one can also affect host health through their interactions with the immune system and other microbial species. Overall, studying Coprobacter secundus subsp. similis 2CBH44 enhances our understanding of microbial diversity and its implications for gastrointestinal health and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter secundus
Strain2CBH44

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter secundus subsp. similis 2CBH44, Complete Genome

Gene Summary

Adenine Count

1284073 bp

Thymine Count

1283960 bp

Guanine Count

812790 bp

Cytosine Count

790643 bp

Genome Length

4171466 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoenolpyruvate carboxykinaseCop2CBH44_31310B6YRN4Positive3968152 - 396975059505.0
hypothetical proteinCop2CBH44_31320Not AvailableNegative3969863 - 39700065611.75
peptidyl-prolyl cis-trans isomeraseCop2CBH44_31330Q5XAQ1Positive3970106 - 397088529058.6
peptidase m16Cop2CBH44_31340P55679Positive3970882 - 397211747660.4
hypothetical proteinCop2CBH44_31350Q8U3R3Positive3972274 - 397306531032.9
hypothetical proteinCop2CBH44_31360A5U683Positive3973283 - 397510371150.2
undecaprenyl-phosphate glucose phosphotransferaseCop2CBH44_31370Q48460Positive3975313 - 397671655034.1
udp-glucose 6-dehydrogenaseCop2CBH44_31380O86422Positive3976747 - 397807549257.8
atp-dependent dna helicase recqCop2CBH44_31390P15043Positive3978072 - 398021080681.9
Trna-lysNot AvailableNot AvailablePositive3980700 - 3980773Not Available

Displaying genes 3211 – 3220 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.