Coprobacter secundus subsp. similis 2CBH44

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter secundus subsp. similis 2CBH44 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This subspecies is part of the genus Coprobacter, which is known to inhabit the gastrointestinal tract of various animals. The significance of Gram-negative bacteria lies in their unique cell wall structure, which consists of an outer membrane containing lipopolysaccharides, contributing to their pathogenic potential and interactions with host organisms. The bacterium has been cataloged under accession number AP023322.1, indicating its genetic sequence has been documented in a public database, which allows for further studies on its genetic characteristics and potential applications. The singular replicon suggests a streamlined genomic organization, which may influence its metabolic capabilities and ecological roles within its environment. Understanding the characteristics of Coprobacter secundus subsp. similis 2CBH44 can provide insights into its ecological interactions, particularly in the context of gut microbiota. The presence of such bacteria is essential for maintaining a balanced microbial community, which plays a crucial role in digestion and nutrient absorption in hosts. Gram-negative species like this one can also affect host health through their interactions with the immune system and other microbial species. Overall, studying Coprobacter secundus subsp. similis 2CBH44 enhances our understanding of microbial diversity and its implications for gastrointestinal health and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter secundus
Strain2CBH44

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter secundus subsp. similis 2CBH44, Complete Genome

Gene Summary

Adenine Count

1284073 bp

Thymine Count

1283960 bp

Guanine Count

812790 bp

Cytosine Count

790643 bp

Genome Length

4171466 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphohydrolaseCop2CBH44_30310Q6L171Negative3833029 - 383356820231.6
aminopeptidaseCop2CBH44_30320Q13867Negative3833822 - 383522553741.4
putative esteraseCop2CBH44_30330Q8P8Y5Negative3835263 - 383686160542.4
peptide methionine sulfoxide reductase msraCop2CBH44_30340O83641Negative3836996 - 383784733026.1
branched chain amino acid aminotransferaseCop2CBH44_30350O26004Negative3838000 - 383901937944.5
ion transporterCop2CBH44_30360Q7TSH7Negative3839345 - 384017831743.8
heat-shock protein hsp15Cop2CBH44_30370P44754Negative3840258 - 384069216662.0
peptidyl-trna hydrolaseCop2CBH44_30380Q5LG56Negative3840700 - 384126320857.4
50s ribosomal protein l25Cop2CBH44_30390B2RHF3Negative3841274 - 384192423711.5
udp-glucose 4-epimeraseCop2CBH44_30400P55180Positive3842265 - 384329937946.8

Displaying genes 3111 – 3120 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.