Coprobacter secundus subsp. similis 2CBH44

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter secundus subsp. similis 2CBH44 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This subspecies is part of the genus Coprobacter, which is known to inhabit the gastrointestinal tract of various animals. The significance of Gram-negative bacteria lies in their unique cell wall structure, which consists of an outer membrane containing lipopolysaccharides, contributing to their pathogenic potential and interactions with host organisms. The bacterium has been cataloged under accession number AP023322.1, indicating its genetic sequence has been documented in a public database, which allows for further studies on its genetic characteristics and potential applications. The singular replicon suggests a streamlined genomic organization, which may influence its metabolic capabilities and ecological roles within its environment. Understanding the characteristics of Coprobacter secundus subsp. similis 2CBH44 can provide insights into its ecological interactions, particularly in the context of gut microbiota. The presence of such bacteria is essential for maintaining a balanced microbial community, which plays a crucial role in digestion and nutrient absorption in hosts. Gram-negative species like this one can also affect host health through their interactions with the immune system and other microbial species. Overall, studying Coprobacter secundus subsp. similis 2CBH44 enhances our understanding of microbial diversity and its implications for gastrointestinal health and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter secundus
Strain2CBH44

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter secundus subsp. similis 2CBH44, Complete Genome

Gene Summary

Adenine Count

1284073 bp

Thymine Count

1283960 bp

Guanine Count

812790 bp

Cytosine Count

790643 bp

Genome Length

4171466 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCop2CBH44_27440T2KMI3Positive3460222 - 346222876860.4
hypothetical proteinCop2CBH44_27450Q9S3R9Positive3462239 - 3465091103791.0
magnesium transporter mgteCop2CBH44_27460Q5SMG8Negative3465188 - 346653449849.0
ribosomal rna small subunit methyltransferase aCop2CBH44_27470A6LF39Negative3466572 - 346736030522.1
dolichol-p-glucose synthetaseCop2CBH44_27480Not AvailablePositive3467511 - 346854539745.0
aminoacyl-histidine dipeptidaseCop2CBH44_27490P15288Positive3468557 - 347002353935.6
mexh family multidrug efflux rnd transporter periplasmic adaptor subunitCop2CBH44_27500D3V7P2Positive3470183 - 347125639713.2
acriflavin resistance proteinCop2CBH44_27510Q57124Positive3471293 - 3474355112606.0
membrane proteinCop2CBH44_27520Q9ZHD2Positive3474352 - 347565649307.9
heparinaseCop2CBH44_27530Not AvailableNegative3475734 - 3478382101686.0

Displaying genes 2821 – 2830 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.