Coprobacter secundus subsp. similis 2CBH44

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter secundus subsp. similis 2CBH44 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This subspecies is part of the genus Coprobacter, which is known to inhabit the gastrointestinal tract of various animals. The significance of Gram-negative bacteria lies in their unique cell wall structure, which consists of an outer membrane containing lipopolysaccharides, contributing to their pathogenic potential and interactions with host organisms. The bacterium has been cataloged under accession number AP023322.1, indicating its genetic sequence has been documented in a public database, which allows for further studies on its genetic characteristics and potential applications. The singular replicon suggests a streamlined genomic organization, which may influence its metabolic capabilities and ecological roles within its environment. Understanding the characteristics of Coprobacter secundus subsp. similis 2CBH44 can provide insights into its ecological interactions, particularly in the context of gut microbiota. The presence of such bacteria is essential for maintaining a balanced microbial community, which plays a crucial role in digestion and nutrient absorption in hosts. Gram-negative species like this one can also affect host health through their interactions with the immune system and other microbial species. Overall, studying Coprobacter secundus subsp. similis 2CBH44 enhances our understanding of microbial diversity and its implications for gastrointestinal health and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter secundus
Strain2CBH44

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter secundus subsp. similis 2CBH44, Complete Genome

Gene Summary

Adenine Count

1284073 bp

Thymine Count

1283960 bp

Guanine Count

812790 bp

Cytosine Count

790643 bp

Genome Length

4171466 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-galactosidaseCop2CBH44_17720Q8RX86Positive2237252 - 223922273322.2
hypothetical proteinCop2CBH44_17730D5EV35Positive2239219 - 223955112391.1
hypothetical proteinCop2CBH44_17740D5EV35Positive2239606 - 224003715984.1
hypothetical proteinCop2CBH44_17750Not AvailableNegative2240488 - 22406435755.98
4fe-4s ferredoxinCop2CBH44_17760Not AvailableNegative2240926 - 224204440536.4
tigr01212 family radical sam proteinCop2CBH44_17770O35008Negative2242063 - 224299235934.2
succinyl-diaminopimelate desuccinylaseCop2CBH44_17780Q9D1A2Negative2243005 - 224436350390.4
chorismate synthaseCop2CBH44_17790A6L3D0Negative2244368 - 224544139086.9
membrane proteinCop2CBH44_17800P37665Positive2245682 - 224637123358.0
thiazole biosynthesis protein thijCop2CBH44_17810Q9VA37Positive2246547 - 224709819394.8

Displaying genes 1801 – 1810 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.