Coprobacter secundus subsp. similis 2CBH44

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Coprobacter

Description

Coprobacter secundus subsp. similis 2CBH44 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This subspecies is part of the genus Coprobacter, which is known to inhabit the gastrointestinal tract of various animals. The significance of Gram-negative bacteria lies in their unique cell wall structure, which consists of an outer membrane containing lipopolysaccharides, contributing to their pathogenic potential and interactions with host organisms. The bacterium has been cataloged under accession number AP023322.1, indicating its genetic sequence has been documented in a public database, which allows for further studies on its genetic characteristics and potential applications. The singular replicon suggests a streamlined genomic organization, which may influence its metabolic capabilities and ecological roles within its environment. Understanding the characteristics of Coprobacter secundus subsp. similis 2CBH44 can provide insights into its ecological interactions, particularly in the context of gut microbiota. The presence of such bacteria is essential for maintaining a balanced microbial community, which plays a crucial role in digestion and nutrient absorption in hosts. Gram-negative species like this one can also affect host health through their interactions with the immune system and other microbial species. Overall, studying Coprobacter secundus subsp. similis 2CBH44 enhances our understanding of microbial diversity and its implications for gastrointestinal health and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusCoprobacter
SpeciesCoprobacter secundus
Strain2CBH44

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprobacter secundus subsp. similis 2CBH44, Complete Genome

Gene Summary

Adenine Count

1284073 bp

Thymine Count

1283960 bp

Guanine Count

812790 bp

Cytosine Count

790643 bp

Genome Length

4171466 bp

Protein-coding Genes

3277 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-b crispr-associated protein cas5Cop2CBH44_12270Not AvailableNegative1525750 - 152642725751.8
type i-b crispr-associated protein cas7/cst2/devrCop2CBH44_12280Not AvailableNegative1526427 - 152748539856.4
type i-b crispr-associated protein cas8b1/cst1Cop2CBH44_12290Not AvailableNegative1527503 - 152890054241.8
crispr-associated endoribonucleaseCop2CBH44_12300Q57820Negative1529244 - 153003230778.3
rna pseudouridine synthaseCop2CBH44_12310P59831Negative1530107 - 153172662811.7
hypothetical proteinCop2CBH44_12320P43777Negative1532135 - 153250613828.8
rna-binding proteinCop2CBH44_12330P46837Negative1532514 - 153464080074.4
hypothetical proteinCop2CBH44_12340Q2K8C8Negative1534624 - 153610256063.7
lipoproteinCop2CBH44_12350Not AvailableNegative1536113 - 153706635610.6
phosphoesteraseCop2CBH44_12360O34870Negative1537080 - 153826745978.8

Displaying genes 1251 – 1260 of 3359 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.