Pseudomonas tritici SWRI145

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas tritici SWRI145 is characterized by possessing a single replicon, which is a notable trait among bacterial species. This single-replicon structure can impact the organism's genetic stability and replication efficiency. The genome of Pseudomonas tritici SWRI145 is cataloged under the accession CP077084.1, facilitating its identification and classification in microbial databases. Pseudomonas species, including Pseudomonas tritici, are known for their versatility in various environments, and they often play roles in plant interactions, including both beneficial and pathogenic relationships. Understanding the genetic makeup and replicon structure of Pseudomonas tritici SWRI145 can provide insights into its ecological roles, particularly in agricultural settings. The presence of a single replicon may suggest certain advantages in terms of gene regulation and adaptation to environmental stresses. It can influence the organism's ability to thrive in various habitats, including soil and plant-related environments. This adaptability is essential for its ecological interactions and potential applications in agriculture, such as biocontrol agents or plant growth promoters. In summary, the single replicon structure of Pseudomonas tritici SWRI145, alongside its genomic access point, positions it as a significant player in microbial ecology, especially in relation to plant health and soil dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas tritici
StrainSWRI145

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas tritici SWRI145
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas tritici SWRI145, Complete Genome

Gene Summary

Adenine Count

1245901 bp

Thymine Count

1258057 bp

Guanine Count

1869658 bp

Cytosine Count

1866579 bp

Genome Length

6240195 bp

Protein-coding Genes

5581 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorHU722_0014375P45785Negative3227295 - 322808029583.6
apc family permeaseHU722_0014380P9WQM2Positive3228280 - 322964447921.0
p1 family peptidaseHU722_0014385A0MTQ2Positive3229654 - 323075738815.1
serralysin family metalloproteaseHU722_0014390A0A0C5CJR8Positive3231124 - 323255749394.2
protease inhibitor inh/omp19 family proteinHU722_0014395O87807Positive3232607 - 323297513354.1
type i secretion system permease/atpaseHU722_0014400Q03024Positive3233079 - 323483062926.9
hlyd family type i secretion periplasmic adaptor subunitHU722_0014405Q03025Positive3234827 - 323614048307.7
tolc family outer membrane proteinHU722_0014410Q03027Positive3236143 - 323747749585.9
ygdi/ygdr family lipoproteinHU722_0014415Not AvailableNegative3237635 - 32378598165.89
vrr-nuc domain-containing proteinHU722_0014420Q9I2N0Positive3238046 - 323969263547.5

Displaying genes 2981 – 2990 of 5754 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.