Pseudomonas tritici SWRI145

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas tritici SWRI145 is characterized by possessing a single replicon, which is a notable trait among bacterial species. This single-replicon structure can impact the organism's genetic stability and replication efficiency. The genome of Pseudomonas tritici SWRI145 is cataloged under the accession CP077084.1, facilitating its identification and classification in microbial databases. Pseudomonas species, including Pseudomonas tritici, are known for their versatility in various environments, and they often play roles in plant interactions, including both beneficial and pathogenic relationships. Understanding the genetic makeup and replicon structure of Pseudomonas tritici SWRI145 can provide insights into its ecological roles, particularly in agricultural settings. The presence of a single replicon may suggest certain advantages in terms of gene regulation and adaptation to environmental stresses. It can influence the organism's ability to thrive in various habitats, including soil and plant-related environments. This adaptability is essential for its ecological interactions and potential applications in agriculture, such as biocontrol agents or plant growth promoters. In summary, the single replicon structure of Pseudomonas tritici SWRI145, alongside its genomic access point, positions it as a significant player in microbial ecology, especially in relation to plant health and soil dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas tritici
StrainSWRI145

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas tritici SWRI145
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas tritici SWRI145, Complete Genome

Gene Summary

Adenine Count

1245901 bp

Thymine Count

1258057 bp

Guanine Count

1869658 bp

Cytosine Count

1866579 bp

Genome Length

6240195 bp

Protein-coding Genes

5581 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pectate lyaseHU722_0011775P27027Positive2620626 - 262156434291.2
glycoside hydrolase family 68 proteinHU722_0011780O52408Positive2621816 - 262306646215.0
sugar abc transporter permeaseHU722_0011785P0AGI6Negative2623318 - 262445439882.3
d-xylose abc transporter atp-binding proteinHU722_0011790Q48J74Negative2624455 - 262599955620.7
d-xylose abc transporter substrate-binding proteinHU722_0011795P37387Negative2626005 - 262700636025.3
xylose isomeraseHU722_0011800C3K8E3Negative2627108 - 262842449454.3
xylr family transcriptional regulatorHU722_0011805P0ACI5Positive2628564 - 262973642752.7
sugar-binding transcriptional regulatorHU722_0011810Q2YIQ4Positive2629825 - 263080235221.4
dihydroxyacetone kinase subunit lHU722_0011815Q92EU3Negative2630988 - 263163522428.8
dihydroxyacetone kinase subunit dhakHU722_0011820Q92EU2Negative2631639 - 263264035134.6

Displaying genes 2461 – 2470 of 5754 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.