Pseudomonas shahriarae SWRI52

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas shahriarae SWRI52 is characterized by having a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability in various environments. The genomic data for this strain is documented under the accession CP077085.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As part of the Pseudomonas genus, which is known for its metabolic versatility and ecological significance, P. shahriarae SWRI52 may play a role in biogeochemical cycles and could be involved in the degradation of organic compounds. This trait is particularly relevant in environmental microbiology, where Pseudomonas species are often utilized for bioremediation purposes due to their ability to metabolize pollutants. Overall, the presence of a single replicon in Pseudomonas shahriarae SWRI52 may facilitate efficient replication and gene expression, potentially allowing the strain to respond effectively to environmental stresses. This adaptability highlights the ecological importance of Pseudomonas species in maintaining ecosystem balance and their potential utility in biotechnology for environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas shahriarae
StrainSWRI52

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas shahriarae SWRI52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas shahriarae SWRI52, Complete Genome

Gene Summary

Adenine Count

1194650 bp

Thymine Count

1191221 bp

Guanine Count

1829659 bp

Cytosine Count

1838675 bp

Genome Length

6054205 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system minor pseudopilin gsphHU773_015485Not AvailableNegative3499077 - 349952616516.9
type ii secretion system major pseudopilin gspgHU773_015490P45773Negative3499529 - 349997216255.5
type ii secretion system inner membrane protein gspfHU773_015495P31705Negative3500017 - 350121943493.1
flp pilus assembly complex atpase component tadaHU773_015500P31741Negative3501219 - 350266752589.6
type ii secretion system secretin gspdHU773_015505P35818Negative3502673 - 350461669193.0
general secretion pathway protein gspbHU773_015510Not AvailableNegative3504630 - 350507316252.8
lipoprotein uxpaHU773_015515Not AvailableNegative3505046 - 350669859646.1
phox family phosphataseHU773_015520Not AvailablePositive3506929 - 350895972367.2
type ii secretion system minor pseudopilin gspkHU773_015525P15750Negative3509419 - 351038435930.5
twin-arginine translocase tata/tate family subunitHU773_015530A4XPM2Positive3510546 - 35107617524.29

Displaying genes 3131 – 3140 of 5463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.