Pseudomonas shahriarae SWRI52

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas shahriarae SWRI52 is characterized by having a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability in various environments. The genomic data for this strain is documented under the accession CP077085.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As part of the Pseudomonas genus, which is known for its metabolic versatility and ecological significance, P. shahriarae SWRI52 may play a role in biogeochemical cycles and could be involved in the degradation of organic compounds. This trait is particularly relevant in environmental microbiology, where Pseudomonas species are often utilized for bioremediation purposes due to their ability to metabolize pollutants. Overall, the presence of a single replicon in Pseudomonas shahriarae SWRI52 may facilitate efficient replication and gene expression, potentially allowing the strain to respond effectively to environmental stresses. This adaptability highlights the ecological importance of Pseudomonas species in maintaining ecosystem balance and their potential utility in biotechnology for environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas shahriarae
StrainSWRI52

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas shahriarae SWRI52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas shahriarae SWRI52, Complete Genome

Gene Summary

Adenine Count

1194650 bp

Thymine Count

1191221 bp

Guanine Count

1829659 bp

Cytosine Count

1838675 bp

Genome Length

6054205 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dotu family type vi secretion system proteinHU773_000260P39064Negative55291 - 5658047032.7
type vi secretion system baseplate subunit tsskHU773_000265Q9I753Negative56587 - 5792148479.1
type vi secretion system lipoprotein tssjHU773_000270Not AvailableNegative57940 - 5844618304.9
type vi secretion system-associated fha domain protein taghHU773_000275Not AvailableNegative58490 - 5983049116.1
type vi secretion system protein tssaHU773_000280Q9I750Positive60233 - 6125236757.3
type vi secretion system contractile sheath small subunitHU773_000285Q9I749Positive61307 - 6181318403.2
type vi secretion system contractile sheath large subunitHU773_000290Q9I748Positive61816 - 6331255647.4
type vi secretion system tube protein hcpHU773_000295Q9I747Positive63460 - 6394817588.0
type vi secretion system amidase effector protein tae4HU773_000300Not AvailablePositive64030 - 6447016765.8
hypothetical proteinHU773_000305Not AvailablePositive64467 - 6491316532.8

Displaying genes 121 – 130 of 5463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.