Pseudomonas shahriarae SWRI52

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas shahriarae SWRI52 is characterized by having a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability in various environments. The genomic data for this strain is documented under the accession CP077085.1, providing a reference point for researchers interested in studying its genetic makeup and potential applications. As part of the Pseudomonas genus, which is known for its metabolic versatility and ecological significance, P. shahriarae SWRI52 may play a role in biogeochemical cycles and could be involved in the degradation of organic compounds. This trait is particularly relevant in environmental microbiology, where Pseudomonas species are often utilized for bioremediation purposes due to their ability to metabolize pollutants. Overall, the presence of a single replicon in Pseudomonas shahriarae SWRI52 may facilitate efficient replication and gene expression, potentially allowing the strain to respond effectively to environmental stresses. This adaptability highlights the ecological importance of Pseudomonas species in maintaining ecosystem balance and their potential utility in biotechnology for environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas shahriarae
StrainSWRI52

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas shahriarae SWRI52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas shahriarae SWRI52, Complete Genome

Gene Summary

Adenine Count

1194650 bp

Thymine Count

1191221 bp

Guanine Count

1829659 bp

Cytosine Count

1838675 bp

Genome Length

6054205 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

145 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hdod domain-containing proteinHU773_000210O83112Positive40783 - 4218351374.9
scp2 sterol-binding domain-containing proteinHU773_000215Not AvailableNegative42307 - 4268414162.6
glycine zipper 2tm domain-containing proteinHU773_000220Not AvailableNegative42810 - 4373932443.2
formylglycine-generating enzyme family proteinHU773_000225V9TSX0Negative43823 - 4553562230.1
abc transporter permeaseHU773_000230Not AvailableNegative45528 - 4671241852.2
abc transporter atp-binding proteinHU773_000235Q2RU16Negative46712 - 4741624775.0
serine/threonine-protein kinaseHU773_000240P54744Negative47416 - 50427108117.0
protein phosphatase 2c domain-containing proteinHU773_000245P9WHW4Negative50424 - 5114325852.8
type vi secretion system-associated protein tagfHU773_000250Not AvailableNegative51144 - 5179723115.6
type vi secretion system membrane subunit tssmHU773_000255Q9I755Negative51794 - 55294128262.0

Displaying genes 111 – 120 of 5463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.