Pseudomonas hamedanensis SWRI65

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas hamedanensis SWRI65 is characterized by having a single replicon, which is indicative of its chromosomal structure. The genomic data for this strain is accessible under the accession number CP077091.1. This single-replicon feature may contribute to its stability and adaptability in various environments. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant-associated environments. While specific ecological insights into Pseudomonas hamedanensis SWRI65 are limited, its classification within the Pseudomonas genus suggests that it may possess traits enabling it to engage in nutrient cycling and potentially contribute to bioremediation processes. Overall, the genomic characteristics of Pseudomonas hamedanensis SWRI65 highlight its potential ecological roles, emphasizing the importance of studying such microorganisms to understand their contributions to environmental health and their applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas hamedanensis
StrainSWRI65

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas hamedanensis SWRI65
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas hamedanensis SWRI65, Complete Genome

Gene Summary

Adenine Count

1223401 bp

Thymine Count

1195253 bp

Guanine Count

1788486 bp

Cytosine Count

1838198 bp

Genome Length

6045338 bp

Protein-coding Genes

5199 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssgHU739_018350Not AvailablePositive4236727 - 423773438684.5
type vi secretion system atpase tsshHU739_018355Q9I742Positive4237746 - 424040396504.9
sigma 54-interacting transcriptional regulatorHU739_018360P25852Positive4240414 - 424193455711.2
type vi secretion proteinHU739_018365Not AvailablePositive4242232 - 42423725073.11
type vi secretion system-associated fha domain protein taghHU739_018370C1AAD9Positive4242391 - 424358744517.4
type vi secretion system lipoprotein tssjHU739_018375Not AvailablePositive4243593 - 424409318549.2
type vi secretion system baseplate subunit tsskHU739_018380Q9I753Positive4244096 - 424542749560.5
type ivb secretion system protein icmh/dotuHU739_018385Not AvailablePositive4245433 - 424630833107.8
type vi secretion system membrane subunit tssmHU739_018390Q9I755Positive4246323 - 4249862133472.0
serine/threonine-protein phosphataseHU739_018395O34779Positive4249862 - 425059026289.2

Displaying genes 3671 – 3680 of 5330 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.