Pseudomonas hamedanensis SWRI65

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas hamedanensis SWRI65 is characterized by having a single replicon, which is indicative of its chromosomal structure. The genomic data for this strain is accessible under the accession number CP077091.1. This single-replicon feature may contribute to its stability and adaptability in various environments. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant-associated environments. While specific ecological insights into Pseudomonas hamedanensis SWRI65 are limited, its classification within the Pseudomonas genus suggests that it may possess traits enabling it to engage in nutrient cycling and potentially contribute to bioremediation processes. Overall, the genomic characteristics of Pseudomonas hamedanensis SWRI65 highlight its potential ecological roles, emphasizing the importance of studying such microorganisms to understand their contributions to environmental health and their applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas hamedanensis
StrainSWRI65

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas hamedanensis SWRI65
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas hamedanensis SWRI65, Complete Genome

Gene Summary

Adenine Count

1223401 bp

Thymine Count

1195253 bp

Guanine Count

1788486 bp

Cytosine Count

1838198 bp

Genome Length

6045338 bp

Protein-coding Genes

5199 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dopa 4,5-dioxygenase family proteinHU739_017450P56739Negative4039629 - 403995512219.8
nad(p)h-binding proteinHU739_017455Not AvailablePositive4040038 - 404070623649.4
lysr family transcriptional regulatorHU739_017460P0A9F8Negative4040710 - 404166035170.4
choline-sulfataseHU739_017465O69787Positive4041775 - 404328957111.7
choline abc transporter substrate-binding proteinHU739_017470Q9L4K3Positive4043306 - 404422633233.0
sulp family inorganic anion transporterHU739_017475Q8GYH8Positive4044438 - 404600656500.3
shikimate dehydrogenaseHU739_017480A4XNB9Negative4046115 - 404693629099.8
oxygen-dependent coproporphyrinogen oxidaseHU739_017485Q3KKE0Negative4046946 - 404786034491.3
quinone oxidoreductaseHU739_017490P43903Positive4048012 - 404898934313.0
amp-binding proteinHU739_017495Q72K16Negative4049011 - 405033346997.2

Displaying genes 3491 – 3500 of 5330 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.