Polaribacter pectinis L12M9

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter pectinis L12M9 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism is cataloged under the accession number CP060695.1, which provides a reference for genomic information. The classification as Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for this group of bacteria. The rod shape suggests that it may exhibit specific motility and growth patterns, often associated with nutrient acquisition and environmental adaptation. Understanding the genomic structure and the presence of a single replicon can provide insights into the organism’s genetic stability and replication processes. The streamlined genomic architecture may facilitate efficient resource use, which is crucial for survival in various environments. Biologically, the traits of Polaribacter pectinis L12M9 highlight its potential role in ecological interactions, particularly in marine environments where such bacteria are often found. The Gram-negative nature and rod shape may allow it to effectively interact with other microorganisms and contribute to nutrient cycling. These characteristics suggest that Polaribacter pectinis L12M9 could play a significant role in the degradation of organic matter, influencing the dynamics of microbial communities in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter pectinis
StrainL12M9

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter pectinis L12M9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter pectinis L12M9, Complete Genome

Gene Summary

Adenine Count

1217468 bp

Thymine Count

1222257 bp

Guanine Count

514516 bp

Cytosine Count

516912 bp

Genome Length

3471153 bp

Protein-coding Genes

3024 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
toxin-antitoxin system ywqk family antitoxinH9W90_03360Not AvailablePositive707325 - 70804427842.9
trna 2-thiouridine(34) synthase mnmaH9W90_03365A6H0G9Positive708176 - 70936344747.5
s8 family serine peptidaseH9W90_03370Q5JIZ5Positive709417 - 71109662264.2
nitronate monooxygenaseH9W90_03375Q9I4V0Positive711096 - 71203733977.6
cold-shock proteinH9W90_03380O30875Positive712155 - 7123467142.35
ywbe family proteinH9W90_03385P39588Positive712432 - 7126297294.08
lytic transglycosylase domain-containing proteinH9W90_03390P0AEZ8Negative712642 - 71354434397.5
alpha/beta hydrolaseH9W90_03395Not AvailableNegative713589 - 71424825267.1
hypothetical proteinH9W90_03400Not AvailableNegative714248 - 71500328841.0
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabH9W90_03405P54462Negative715021 - 71635550091.6

Displaying genes 671 – 680 of 3072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.