Polaribacter pectinis L12M9

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter pectinis L12M9 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism is cataloged under the accession number CP060695.1, which provides a reference for genomic information. The classification as Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for this group of bacteria. The rod shape suggests that it may exhibit specific motility and growth patterns, often associated with nutrient acquisition and environmental adaptation. Understanding the genomic structure and the presence of a single replicon can provide insights into the organism’s genetic stability and replication processes. The streamlined genomic architecture may facilitate efficient resource use, which is crucial for survival in various environments. Biologically, the traits of Polaribacter pectinis L12M9 highlight its potential role in ecological interactions, particularly in marine environments where such bacteria are often found. The Gram-negative nature and rod shape may allow it to effectively interact with other microorganisms and contribute to nutrient cycling. These characteristics suggest that Polaribacter pectinis L12M9 could play a significant role in the degradation of organic matter, influencing the dynamics of microbial communities in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter pectinis
StrainL12M9

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter pectinis L12M9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter pectinis L12M9, Complete Genome

Gene Summary

Adenine Count

1217468 bp

Thymine Count

1222257 bp

Guanine Count

514516 bp

Cytosine Count

516912 bp

Genome Length

3471153 bp

Protein-coding Genes

3024 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alginate lyaseH9W90_14110Q06365Positive3145284 - 314759085265.4
polysaccharide lyase family 7 proteinH9W90_14115Q59478Positive3147611 - 314865739378.9
t9ss type a sorting domain-containing proteinH9W90_14120Not AvailablePositive3148918 - 315027348211.7
alginate lyase family proteinH9W90_14125Q21FJ0Positive3150341 - 315258784640.6
cupin domain-containing proteinH9W90_14130Q05527Positive3152606 - 315298013981.6
tonb-dependent receptorH9W90_14135T2KPJ3Positive3153337 - 3156429114183.0
ragb/susd family nutrient uptake outer membrane proteinH9W90_14140T2KN63Positive3156459 - 315790452719.3
pkd domain-containing proteinH9W90_14145Q9KMU6Positive3157924 - 315892235202.1
polysaccharide lyase family 7 proteinH9W90_14150Q59478Positive3158934 - 315990537800.8
fadr family transcriptional regulatorH9W90_14155O07007Positive3159993 - 316069726695.6

Displaying genes 2821 – 2830 of 3072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.