Polaribacter pectinis L12M9

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter pectinis L12M9 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This organism is cataloged under the accession number CP060695.1, which provides a reference for genomic information. The classification as Gram-negative indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for this group of bacteria. The rod shape suggests that it may exhibit specific motility and growth patterns, often associated with nutrient acquisition and environmental adaptation. Understanding the genomic structure and the presence of a single replicon can provide insights into the organism’s genetic stability and replication processes. The streamlined genomic architecture may facilitate efficient resource use, which is crucial for survival in various environments. Biologically, the traits of Polaribacter pectinis L12M9 highlight its potential role in ecological interactions, particularly in marine environments where such bacteria are often found. The Gram-negative nature and rod shape may allow it to effectively interact with other microorganisms and contribute to nutrient cycling. These characteristics suggest that Polaribacter pectinis L12M9 could play a significant role in the degradation of organic matter, influencing the dynamics of microbial communities in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter pectinis
StrainL12M9

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter pectinis L12M9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter pectinis L12M9, Complete Genome

Gene Summary

Adenine Count

1217468 bp

Thymine Count

1222257 bp

Guanine Count

514516 bp

Cytosine Count

516912 bp

Genome Length

3471153 bp

Protein-coding Genes

3024 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa carboxylase subunit betaH9W90_07010I6YDK7Positive1545145 - 154677359537.7
giy-yig nuclease family proteinH9W90_07015B8FHR2Positive1546800 - 154723417269.7
phosphate acetyltransferaseH9W90_07020Q726S7Positive1547322 - 154941576253.0
acetate kinaseH9W90_07025A5FE24Positive1549418 - 155060543851.1
yebc/pmpr family dna-binding transcriptional regulatorH9W90_07030A5FGS7Positive1550709 - 155142527004.8
amp-binding proteinH9W90_07035Q9CHK3Negative1551437 - 155248039887.3
cpbp family intramembrane metalloproteaseH9W90_07040P37513Negative1552470 - 155343837196.0
o-succinylbenzoate synthaseH9W90_07045Q6ARP5Negative1553442 - 155447939048.0
srpbcc family proteinH9W90_07050Not AvailableNegative1554487 - 155500219521.6
1,4-dihydroxy-2-naphthoate octaprenyltransferaseH9W90_07055P44739Negative1555012 - 155595934487.9

Displaying genes 1401 – 1410 of 3072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.