Agrobacterium vaccinii B7.6

Gram-negativeRodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium vaccinii B7.6 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses flagella, which facilitate motility. Notably, A. vaccinii B7.6 has a unique genomic structure consisting of three replicons. This feature may contribute to its adaptability and versatility in various environments. The organism is identified by specific accessions in genomic databases, which include CP054150.1, CP054151.1, and CP054152.1. These accessions provide valuable resources for researchers interested in the genetic and functional characteristics of A. vaccinii B7.6. The presence of flagella suggests that A. vaccinii B7.6 can actively move towards favorable conditions, which may enhance its survival and colonization in diverse ecological niches. Given its classification within the Agrobacterium genus, this bacterium may also play a role in plant interactions, potentially influencing agricultural practices or plant health. In sum, the characteristics of Agrobacterium vaccinii B7.6, including its Gram-negative status, rod shape, flagella, and unique genomic structure, highlight its potential ecological significance and adaptability. Understanding these traits may provide insights into its role in environmental microbiology and its interactions within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium vaccinii
StrainB7.6

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium vaccinii B7.6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatanaerobic digester
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium vaccinii B7.6, Complete Genome

Gene Summary

Adenine Count

669124 bp

Thymine Count

655679 bp

Guanine Count

899920 bp

Cytosine Count

911901 bp

Genome Length

3136624 bp

Protein-coding Genes

2906 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix domain-containing proteinHRR99_04715Q58549Negative933847 - 93426615238.9
type ii toxin-antitoxin system rele/pare family toxinHRR99_04720Not AvailableNegative934340 - 93465112099.0
type ii toxin-antitoxin system pard family antitoxinHRR99_04725Not AvailableNegative934648 - 9349209873.67
ynfa family proteinHRR99_04730Q8UGH9Positive935057 - 93538011464.2
sos response-associated peptidaseHRR99_04735O31916Positive935392 - 93615327896.2
diguanylate cyclaseHRR99_04740Q9A5I5Negative936191 - 93748948178.9
phosphatidylcholine/phosphatidylserine synthaseHRR99_04745Q9ZBM2Negative938051 - 93891731707.4
phosphatidylserine decarboxylaseHRR99_04750Q8UGH4Negative938941 - 93963925510.1
abc transporter atp-binding protein/permeaseHRR99_04755Q2G506Negative939789 - 94167869850.7
lysm peptidoglycan-binding domain-containing proteinHRR99_04760P0ADE7Negative941794 - 94386671422.0

Displaying genes 981 – 990 of 4620 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.