Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRR99_02505 | Not Available | Positive | 523748 - 523942 | 7259.92 |
| duf2207 domain-containing protein | HRR99_02510 | P45848 | Negative | 523962 - 525878 | 68644.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HRR99_02515 | Q2KBU1 | Negative | 525898 - 527160 | 43760.2 |
| lema family protein | HRR99_02520 | A8AVK0 | Negative | 527203 - 527754 | 20322.4 |
| glycine--trna ligase subunit alpha | HRR99_02525 | Q92RL5 | Negative | 527840 - 528796 | 35866.3 |
| glycine--trna ligase subunit beta | HRR99_02530 | A9CK39 | Positive | 529603 - 532017 | 88728.2 |
| duf2218 domain-containing protein | HRR99_02535 | Not Available | Positive | 532058 - 532367 | 11544.9 |
| transcriptional regulator | HRR99_02540 | Not Available | Positive | 532369 - 532683 | 11211.6 |
| duf523 domain-containing protein | HRR99_02545 | Q45584 | Positive | 532680 - 533186 | 17119.5 |
| voc family protein | HRR99_02550 | Not Available | Positive | 533248 - 533724 | 17270.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

