Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | HRR99_02355 | Q54YZ9 | Positive | 492400 - 494064 | 61315.4 |
| eal domain-containing protein | HRR99_02360 | Q9ABX9 | Positive | 494196 - 495554 | 50038.6 |
| smp-30/gluconolactonase/lre family protein | HRR99_02365 | Q92RN9 | Negative | 495604 - 496491 | 31764.8 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | HRR99_02370 | Q92RN8 | Negative | 496495 - 497124 | 21461.3 |
| 2-dehydro-3-deoxygalactonokinase | HRR99_02375 | Q92RN7 | Negative | 497137 - 498054 | 31999.3 |
| sdr family oxidoreductase | HRR99_02380 | Q92RN6 | Negative | 498054 - 498827 | 27270.6 |
| iclr family transcriptional regulator | HRR99_02385 | P37728 | Positive | 498907 - 499740 | 30225.6 |
| luxr family transcriptional regulator | HRR99_02390 | Q6NCZ5 | Positive | 499911 - 500651 | 27754.4 |
| abc transporter substrate-binding protein | HRR99_02395 | P73450 | Positive | 500730 - 501953 | 43806.2 |
| mrp/nbp35 family atp-binding protein | HRR99_02400 | Q54F15 | Positive | 502066 - 503199 | 39664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

