Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system relb/dinj family antitoxin | HRR99_22840 | A0A140ND86 | Negative | 131603 - 131911 | 11175.2 |
| duf2513 domain-containing protein | HRR99_22845 | P44181 | Negative | 131983 - 132384 | 14531.7 |
| hypothetical protein | HRR99_22850 | Not Available | Positive | 132576 - 134891 | 88273.1 |
| voc family protein | HRR99_22855 | A1YPR3 | Positive | 135141 - 135617 | 16715.0 |
| nad(p)h-binding protein | HRR99_22860 | O31512 | Negative | 135942 - 136790 | 31342.0 |
| tetr/acrr family transcriptional regulator c-terminal ligand-binding domain-containing protein | HRR99_22865 | P96676 | Positive | 136866 - 137174 | 11612.5 |
| pyridoxamine 5'-phosphate oxidase family protein | HRR99_22870 | Q7WHW5 | Negative | 137228 - 139282 | 74868.0 |
| glutathione s-transferase | HRR99_22875 | Q52828 | Negative | 139336 - 139947 | 22170.9 |
| lysr family transcriptional regulator | HRR99_22880 | P43011 | Positive | 140068 - 140961 | 32798.9 |
| hypothetical protein | HRR99_22885 | Q9A8Z4 | Negative | 141011 - 141803 | 28308.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

