Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | HRR99_22690 | P07822 | Negative | 101329 - 102162 | 30480.3 |
| tonb-dependent siderophore receptor | HRR99_22695 | Q47162 | Negative | 102230 - 104350 | 77484.0 |
| lysr family transcriptional regulator | HRR99_22700 | P52666 | Positive | 104495 - 105406 | 33252.3 |
| hypothetical protein | HRR99_22705 | Q9RRA9 | Negative | 105696 - 106358 | 24318.9 |
| hypothetical protein | HRR99_22710 | Not Available | Negative | 106360 - 106518 | 5791.83 |
| hypothetical protein | HRR99_22715 | Not Available | Positive | 106585 - 107061 | 17098.5 |
| ompa family protein | HRR99_22720 | Q7NFT5 | Positive | 107058 - 107693 | 23152.0 |
| hypothetical protein | HRR99_22725 | Not Available | Positive | 107695 - 107925 | 7755.76 |
| lipocalin family protein | HRR99_22730 | Q08790 | Negative | 108079 - 108612 | 19949.0 |
| cache domain-containing protein | HRR99_22735 | P55652 | Negative | 109338 - 111170 | 66695.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

