Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | HRR99_22590 | Q6I544 | Positive | 81610 - 82032 | 14917.6 |
| mechanosensitive ion channel family protein | HRR99_22595 | P39285 | Positive | 82099 - 83103 | 35892.1 |
| rrf2 family transcriptional regulator | HRR99_22600 | Q48660 | Negative | 83100 - 83588 | 17725.4 |
| llm class flavin-dependent oxidoreductase | HRR99_22605 | Q53218 | Negative | 83793 - 84833 | 38425.8 |
| duf1622 domain-containing protein | HRR99_22610 | Not Available | Negative | 84867 - 85292 | 15087.6 |
| duf1275 domain-containing protein | HRR99_22615 | O34343 | Negative | 85341 - 86018 | 23375.3 |
| mfs transporter | HRR99_22620 | Q2FW71 | Negative | 86181 - 87779 | 56004.0 |
| doxx family protein | HRR99_22625 | Not Available | Negative | 87776 - 88219 | 15737.4 |
| amidohydrolase | HRR99_22630 | Q68AP4 | Negative | 88378 - 90360 | 72884.4 |
| xapx domain-containing protein | HRR99_22635 | Not Available | Negative | 90360 - 90647 | 10130.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

