Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | HRR99_22540 | Not Available | Negative | 71838 - 72311 | 18391.5 |
| pyridoxamine 5'-phosphate oxidase family protein | HRR99_22545 | Not Available | Negative | 72308 - 72931 | 23661.9 |
| mbl fold metallo-hydrolase | HRR99_22550 | Q7X3T2 | Negative | 73019 - 74005 | 35314.2 |
| alpha/beta hydrolase | HRR99_22555 | A0A2I1BT15 | Negative | 74125 - 74844 | 25376.1 |
| pas domain s-box protein | HRR99_22560 | P15939 | Positive | 75150 - 77048 | 71793.8 |
| response regulator transcription factor | HRR99_22565 | P15940 | Positive | 77041 - 77661 | 22595.4 |
| fic family protein | HRR99_22570 | Q6AY47 | Positive | 78045 - 79118 | 40837.1 |
| lysr family transcriptional regulator | HRR99_22575 | P43011 | Negative | 79228 - 80136 | 32524.4 |
| carboxymuconolactone decarboxylase family protein | HRR99_22580 | P96684 | Positive | 80270 - 80749 | 17873.4 |
| sdr family oxidoreductase | HRR99_22585 | P48279 | Positive | 80818 - 81570 | 26721.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

