Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2160 domain-containing protein | HRR99_21940 | Not Available | Negative | 1512338 - 1512619 | 10403.1 |
| hypothetical protein | HRR99_21945 | Not Available | Negative | 1512616 - 1513128 | 19336.0 |
| carbohydrate abc transporter permease | HRR99_21950 | P9WG00 | Negative | 1513128 - 1513946 | 30354.6 |
| sugar abc transporter permease | HRR99_21955 | O51924 | Negative | 1513961 - 1514827 | 32498.4 |
| abc transporter atp-binding protein | HRR99_21960 | Q2L0H5 | Negative | 1514830 - 1515900 | 39427.3 |
| abc transporter atp-binding protein | HRR99_21965 | Q9Z3R9 | Negative | 1515913 - 1516995 | 39451.7 |
| glycerol-3-phosphate dehydrogenase | HRR99_21970 | Q2YIQ2 | Negative | 1517068 - 1518576 | 55732.2 |
| deor/glpr transcriptional regulator | HRR99_21975 | Q51391 | Negative | 1518680 - 1519459 | 28164.8 |
| peptide abc transporter substrate-binding protein | HRR99_21980 | P23843 | Positive | 1519673 - 1521271 | 58796.1 |
| oligopeptide abc transporter permease oppb | HRR99_21985 | P45054 | Positive | 1521418 - 1522341 | 33540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

