Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | HRR99_19340 | Q9I310 | Negative | 934739 - 935977 | 45667.0 |
| sdr family oxidoreductase | HRR99_19345 | Q9ZNN8 | Negative | 936298 - 937083 | 27842.2 |
| sugar-binding transcriptional regulator | HRR99_19350 | P39140 | Negative | 937112 - 938065 | 34426.8 |
| fggy-family carbohydrate kinase | HRR99_19355 | Q6D5T8 | Negative | 938086 - 939555 | 51789.8 |
| transketolase family protein | HRR99_19360 | A6KXB3 | Negative | 939700 - 940656 | 33243.2 |
| transketolase | HRR99_19365 | A6KXB4 | Negative | 940656 - 941465 | 29656.3 |
| abc transporter permease | HRR99_19370 | P0AGI3 | Positive | 941701 - 942681 | 33846.0 |
| sugar abc transporter substrate-binding protein | HRR99_19375 | P36949 | Positive | 942810 - 943736 | 32071.6 |
| sugar abc transporter atp-binding protein | HRR99_19380 | Q9K6J9 | Positive | 943824 - 945302 | 52804.3 |
| sdr family oxidoreductase | HRR99_19385 | C0KTJ6 | Positive | 945317 - 946105 | 27621.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

