Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | HRR99_18490 | B5F3F4 | Negative | 756069 - 757127 | 38304.0 |
| carbohydrate abc transporter permease | HRR99_18495 | O50501 | Negative | 757124 - 757963 | 30423.2 |
| sugar abc transporter permease | HRR99_18500 | O32155 | Negative | 757974 - 758921 | 35763.7 |
| carbohydrate abc transporter substrate-binding protein | HRR99_18505 | Q00749 | Negative | 759053 - 760312 | 45975.4 |
| n-acetylmuramic acid 6-phosphate etherase | HRR99_18510 | Q9RYU5 | Negative | 760375 - 761268 | 30046.9 |
| n-acetylglucosamine kinase | HRR99_18515 | Q9KUA9 | Positive | 761476 - 762363 | 30408.0 |
| gntr family transcriptional regulator | HRR99_18520 | O34817 | Positive | 762360 - 763124 | 27889.7 |
| sis domain-containing protein | HRR99_18525 | Q8TZ14 | Positive | 763159 - 764181 | 35558.1 |
| n-acetylglucosamine-6-phosphate deacetylase | HRR99_18530 | O32445 | Positive | 764184 - 765338 | 40479.6 |
| duf1127 domain-containing protein | HRR99_18535 | Not Available | Negative | 765695 - 765841 | 5542.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

