Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | HRR99_01205 | O53732 | Negative | 239989 - 241206 | 46338.2 |
| duf1365 domain-containing protein | HRR99_01210 | Not Available | Negative | 241193 - 242026 | 31484.9 |
| nad(p)/fad-dependent oxidoreductase | HRR99_01215 | Q8GAJ0 | Negative | 242023 - 243384 | 50137.4 |
| sigma-70 family rna polymerase sigma factor | HRR99_01220 | Q3IYV6 | Positive | 243612 - 244181 | 21617.9 |
| cupin domain-containing protein | HRR99_01225 | P40685 | Positive | 244178 - 244837 | 23916.3 |
| duf2177 family protein | HRR99_01230 | Not Available | Positive | 245037 - 245432 | 14123.4 |
| carbohydrate kinase | HRR99_01235 | Q8ESX1 | Negative | 245417 - 246802 | 49226.5 |
| l-rhamnose mutarotase | HRR99_01240 | A9CFA8 | Negative | 246799 - 247122 | 12341.8 |
| abc transporter permease | HRR99_01245 | Q57HE1 | Negative | 247126 - 248133 | 35326.6 |
| abc transporter permease | HRR99_01250 | P44736 | Negative | 248130 - 249131 | 34744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

