Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | HRR99_17640 | O05494 | Positive | 565180 - 565827 | 24174.1 |
| pyridoxal kinase pdxy | HRR99_17645 | Q1AYE5 | Positive | 565931 - 566806 | 31649.6 |
| carbonic anhydrase | HRR99_17650 | P42737 | Positive | 566883 - 567524 | 23813.4 |
| lytic murein transglycosylase | HRR99_17655 | P41052 | Negative | 567551 - 568366 | 28713.1 |
| aspartate-semialdehyde dehydrogenase | HRR99_17660 | O67716 | Negative | 568562 - 569596 | 37561.9 |
| mhs family mfs transporter | HRR99_17665 | P0DPR5 | Positive | 570100 - 571986 | 67213.5 |
| mannitol dehydrogenase family protein | HRR99_17670 | P39160 | Negative | 572058 - 573464 | 51124.3 |
| mannonate dehydratase | HRR99_17675 | Q8UAW0 | Negative | 573470 - 574666 | 44626.9 |
| l-idonate 5-dehydrogenase | HRR99_17680 | P39346 | Negative | 574695 - 575735 | 36392.8 |
| trap transporter large permease | HRR99_17685 | Q9KR66 | Negative | 575796 - 577202 | 50059.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

