Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase iron-sulfur subunit | HRR99_16740 | Q8X6I9 | Negative | 363647 - 364282 | 22383.6 |
| hypothetical protein | HRR99_16745 | Not Available | Positive | 364509 - 365030 | 19109.7 |
| xdhc family protein | HRR99_16750 | P77183 | Positive | 365084 - 365425 | 11867.9 |
| xdhc family protein | HRR99_16755 | Q46808 | Positive | 365425 - 366126 | 24913.9 |
| nucleotidyltransferase family protein | HRR99_16760 | O32146 | Negative | 366109 - 366729 | 21279.1 |
| methylmalonyl-coa mutase | HRR99_16765 | O86028 | Positive | 366958 - 369099 | 77498.6 |
| gtp-binding protein | HRR99_16770 | P24203 | Positive | 369212 - 370330 | 40656.7 |
| rok family protein | HRR99_16775 | A0KYQ6 | Negative | 370332 - 371285 | 32886.7 |
| amidohydrolase | HRR99_16780 | P45493 | Negative | 371321 - 372502 | 42506.6 |
| amino acid abc transporter atp-binding protein | HRR99_16785 | O34677 | Negative | 372590 - 373372 | 28586.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

