Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | HRR99_00955 | P12608 | Positive | 187461 - 188738 | 45557.5 |
| thiol oxidoreductase | HRR99_00960 | Not Available | Positive | 188892 - 190598 | 61536.6 |
| hypothetical protein | HRR99_00965 | Not Available | Positive | 190598 - 191719 | 40641.5 |
| duf1513 domain-containing protein | HRR99_00970 | Q9I609 | Positive | 191723 - 192814 | 39499.0 |
| tryptophan-rich sensory protein | HRR99_00975 | Q8KBX2 | Positive | 192865 - 193317 | 17106.7 |
| paai family thioesterase | HRR99_00980 | Q97YR6 | Positive | 193387 - 193836 | 16410.8 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | HRR99_00985 | Q2YT29 | Positive | 193833 - 194471 | 22723.3 |
| glutamine-hydrolyzing gmp synthase | HRR99_00990 | Q8UIL2 | Positive | 194556 - 196133 | 57623.3 |
| 2'-5' rna ligase family protein | HRR99_00995 | Not Available | Positive | 196241 - 196915 | 25050.1 |
| hypothetical protein | HRR99_01000 | Not Available | Negative | 197069 - 197236 | 5908.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

