Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HRR99_15190 | Not Available | Negative | 12414 - 12797 | 13286.8 |
| helix-turn-helix transcriptional regulator | HRR99_15195 | A6U5H5 | Negative | 12858 - 13298 | 16003.5 |
| nucleotidyltransferase domain-containing protein | HRR99_15200 | Q58021 | Negative | 13527 - 14450 | 35850.6 |
| cytochrome b | HRR99_15205 | P75925 | Negative | 14658 - 15236 | 21539.7 |
| transposase | HRR99_15210 | Not Available | Negative | 15602 - 15853 | 9895.98 |
| ti-type conjugative transfer relaxase traa | HRR99_15215 | P55418 | Positive | 16065 - 19421 | 123777.0 |
| formaldehyde dehydrogenase, glutathione-independent | HRR99_15220 | Q9HTE3 | Positive | 19890 - 21080 | 41948.4 |
| transposase | HRR99_15225 | P16942 | Positive | 21612 - 22166 | 20886.6 |
| ggdef domain-containing protein | HRR99_15230 | Q8X8Q3 | Positive | 22177 - 22599 | 14891.7 |
| hypothetical protein | HRR99_15235 | Not Available | Negative | 23238 - 23483 | 8933.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

