Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein recr | HRR99_15090 | Q8UJ45 | Positive | 3129159 - 3129764 | 21429.1 |
| lytic murein transglycosylase | HRR99_15095 | P41052 | Positive | 3129826 - 3131091 | 45650.4 |
| 2-polyprenylphenol 6-hydroxylase | HRR99_15100 | A1U669 | Negative | 3131114 - 3132688 | 58515.2 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | HRR99_15105 | Q8UIH5 | Negative | 3132726 - 3133502 | 28792.3 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | HRR99_15110 | Q8UIH4 | Positive | 3133649 - 3134536 | 32241.8 |
| enoyl-coa hydratase | HRR99_15115 | Q52995 | Positive | 3134555 - 3135328 | 27568.4 |
| 30s ribosomal protein s20 | HRR99_15120 | Q8UIH2 | Positive | 3135583 - 3135849 | 9568.65 |
| hypothetical protein | HRR99_15125 | Not Available | Positive | 721 - 1125 | 14150.2 |
| hypothetical protein | HRR99_15130 | Not Available | Positive | 2016 - 2183 | 6430.85 |
| type ii toxin-antitoxin system hipa family toxin | HRR99_15135 | P55564 | Positive | 2608 - 3930 | 49058.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

