Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | HRR99_14540 | B9JXV6 | Positive | 3005796 - 3007016 | 43975.7 |
| tryptophan synthase subunit alpha | HRR99_14545 | Q8UJA9 | Positive | 3007019 - 3007858 | 29338.4 |
| acetyl-coa carboxylase carboxyltransferase subunit beta | HRR99_14550 | A9CKT0 | Positive | 3007896 - 3008789 | 32825.2 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | HRR99_14555 | P15925 | Positive | 3008823 - 3010166 | 47868.8 |
| thioredoxin | HRR99_14560 | P00275 | Negative | 3010275 - 3010595 | 11208.5 |
| double-strand break repair helicase adda | HRR99_14565 | Q043G6 | Negative | 3010673 - 3014227 | 130756.0 |
| double-strand break repair protein addb | HRR99_14570 | Q1RIZ9 | Negative | 3014217 - 3017393 | 115348.0 |
| nucleotidyltransferase family protein | HRR99_14575 | Q9A2M1 | Negative | 3017403 - 3018134 | 26550.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | HRR99_14580 | Q9A2M2 | Negative | 3018150 - 3019658 | 55966.9 |
| pas-domain containing protein | HRR99_14585 | Q9RQQ9 | Negative | 3019655 - 3022240 | 94847.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

