Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | anaerobic digester |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tim44 domain-containing protein | HRR99_14490 | Q5XF06 | Positive | 2995457 - 2996155 | 25801.3 |
| murein transglycosylase a | HRR99_14495 | P0A936 | Positive | 2996152 - 2997270 | 41469.1 |
| smr/muts family protein | HRR99_14500 | P76053 | Positive | 2997270 - 2997839 | 21320.1 |
| helix-turn-helix transcriptional regulator | HRR99_14505 | O32237 | Positive | 2997836 - 2998201 | 13420.2 |
| dna topoisomerase (atp-hydrolyzing) subunit b | HRR99_14510 | P0CAX1 | Positive | 2998360 - 3000795 | 89062.3 |
| nitroreductase family protein | HRR99_14515 | P41401 | Negative | 3000910 - 3001512 | 22124.2 |
| fumarylacetoacetate hydrolase family protein | HRR99_14520 | Q0B628 | Positive | 3001707 - 3002549 | 29635.5 |
| polyhydroxyalkanoate depolymerase | HRR99_14525 | Not Available | Positive | 3002985 - 3004220 | 46359.6 |
| m48 family metallopeptidase | HRR99_14530 | Not Available | Positive | 3004266 - 3005033 | 28433.2 |
| phosphoribosylanthranilate isomerase | HRR99_14535 | Q8UJB1 | Positive | 3005137 - 3005793 | 23127.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

